Brain TR-xQTLs atlas (Nature genetics, 2025): Multi-omic quantitative trait loci link tandem repeat size variation to gene regulation in human brain.
GREGoR Consortium (Genomics Research to Elucidate the Genetics of Rare diseases) (Nature, 2025): GREGoR: Accelerating Genomics for Rare Diseases
TR-Atlas (TR-gnomAD) (Cell, 2024): A genome-wide spectrum of tandem repeat expansions in 338,963 humans
Immune 3′aQTLs (Nature Communications, 2023): Immune-response 3′UTR alternative polyadenylation quantitative trait loci contribute to variation in human complex traits and diseases
3′aTWAS hub (Nature Communications, 2023): Alternative polyadenylation transcriptome-wide association study identifies APA-linked susceptibility genes in brain disorders
3′aQTL-atlas (Nucleic Acids Research, 2022): 3′ aQTL-atlas: an atlas of 3′ UTR alternative polyadenylation quantitative trait loci across human normal tissues
interacCircos (Bioinformatics, 2021): interacCircos: an R package based on JavaScript libraries for the generation of interactive circos plots
CHALM (Nature Communications, 2021): Cellular Heterogeneity–Adjusted cLonal Methylation (CHALM) improves prediction of gene expression
svmATAC (Frontiers in Genetics, 2021): Enhancement and Imputation of Peak Signal Enables Accurate Cell-Type Classification in scATAC-seq
NG-Circos (NAR Genomics and Bioinformatics, 2020): NG-Circos: next-generation Circos for data visualization and interpretation
RAEdb (Database, 2019): RAEdb: a database of enhancers identified by high-throughput reporter assays
Dynamic-BM (Briefings in Bioinformatics, 2018): Dynamic-BM: multispecies Dynamic BodyMap database from temporal RNA-seq data
LncVar (Bioinformatics, 2017): LncVar: a database of genetic variation associated with long non-coding genes
BioCircos (Bioinformatics, 2016): BioCircos. js: an interactive Circos JavaScript library for biological data visualization on web applications