Welcome to NGCircos’s documentation!

Contents:

• 1. Introduction
  • 1.1 About
  • 1.2 NG-Circos & Circos
• 2. Demos
• 3. Getting started
  • Overview of “Getting started”
  • Step0. View demos in locale
  • Step1. Including NGCircos.js
  • Step2. <div> tag to set picture position in html
  • Step3. Genome configuration
  • Step4. Initialization and Main configuration
  • Step5. Add Data configuration
• 4. Function Modules and Data Preparation Tools
  • 4.1 Data Preparation Tools
  • 4.2 SNP module
  • 4.3 SCATTER module
  • 4.4 LINK module
  • 4.5 CNV module
  • 4.6 ARC module
  • 4.7 HEATMAP module
  • 4.8 HISTOGRAM module
  • 4.9 LINE module
  • 4.10 BACKGROUND module
  • 4.11 TEXT module
  • 4.12 WIG module
  • 4.13 LOLLIPOP module
  • 4.14 GENE module
  • 4.15 CHORD module
  • 4.16 REDIRECT module
  • 4.17 DOWNLOAD module
  • 4.18 AUXILIARYLINE module
  • 4.19 LEGEND module
  • 4.20 COMPARE module
  • 4.21 COMBINATION module
  • 4.22 BUBBLE module
• 5. API: Main configuration
  • 5.1 Customize SVG
  • 5.2 Customize genome
  • 5.3 Customize Events
  • 5.4 Customize Tooltips
• 6. API: Data configuration
  • 6.1 SNP module
  • 6.2 SCATTER module
  • 6.3 LINK module
  • 6.4 CNV module
  • 6.5 ARC module
  • 6.6 HEATMAP module
  • 6.7 HISTOGRAM module
  • 6.8 LINE module
  • 6.9 BACKGROUND module
  • 6.10 TEXT module
  • 6.11 WIG module
  • 6.12 LOLLIPOP module
  • 6.13 GENE module
  • 6.14 CHORD module
  • 6.15 REDIRECT module
  • 6.16 DOWNLOAD module
  • 6.17 AUXILIARYLINE module
  • 6.18 LEGEND module
  • 6.19 COMPARE module
  • 6.20 COMBINATION module
  • 6.21 BUBBLE module
• 7. API: Genome configuration
  • 7.1 Genome configuration
  • 7.2 Example: Customize your genome by Main configuration
  • 7.3 Example: Human genome (hg19)
  • 7.4 Example: Add chromosome band on Human genome(hg19)

Indices and tables

• Index

• Module Index

• Search Page